STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG70641.1Uncharacterized membrane protein. (681 aa)    
Predicted Functional Partners:
SHG70694.1
Hypothetical protein.
 
     0.951
SHG70714.1
Protein of unknown function.
 
     0.951
SHG70734.1
Planctomycete cytochrome C.
 
     0.951
SHG70666.1
Chitobiase/beta-hexosaminidase C-terminal domain-containing protein.
 
    
0.832
SHG35262.1
Sugar phosphate isomerase/epimerase.
 
     0.680
SHH03334.1
Gluconate 2-dehydrogenase subunit 3.
  
     0.532
SHG70756.1
Two component transcriptional regulator, LytTR family.
       0.480
SHG70777.1
GHKL domain-containing protein.
       0.480
SHG70859.1
Carbohydrate family 9 binding domain-like.
 
     0.430
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.