Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG73041.1 | SHG73067.1 | SAMN04488116_2292 | SAMN04488116_2293 | LytTr DNA-binding domain-containing protein. | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | 0.537 |
SHG73041.1 | SHG73083.1 | SAMN04488116_2292 | SAMN04488116_2294 | LytTr DNA-binding domain-containing protein. | Hypothetical protein. | 0.537 |
SHG73041.1 | SHG73115.1 | SAMN04488116_2292 | SAMN04488116_2295 | LytTr DNA-binding domain-containing protein. | Metal binding domain of Ada; Manually curated. | 0.537 |
SHG73041.1 | SHG73133.1 | SAMN04488116_2292 | SAMN04488116_2296 | LytTr DNA-binding domain-containing protein. | Hypothetical protein. | 0.537 |
SHG73041.1 | SHG73155.1 | SAMN04488116_2292 | SAMN04488116_2297 | LytTr DNA-binding domain-containing protein. | Protein N-acetyltransferase, RimJ/RimL family. | 0.413 |
SHG73067.1 | SHG73041.1 | SAMN04488116_2293 | SAMN04488116_2292 | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | LytTr DNA-binding domain-containing protein. | 0.537 |
SHG73067.1 | SHG73083.1 | SAMN04488116_2293 | SAMN04488116_2294 | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | Hypothetical protein. | 0.932 |
SHG73067.1 | SHG73115.1 | SAMN04488116_2293 | SAMN04488116_2295 | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | Metal binding domain of Ada; Manually curated. | 0.863 |
SHG73067.1 | SHG73133.1 | SAMN04488116_2293 | SAMN04488116_2296 | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | Hypothetical protein. | 0.773 |
SHG73067.1 | SHG73155.1 | SAMN04488116_2293 | SAMN04488116_2297 | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | Protein N-acetyltransferase, RimJ/RimL family. | 0.571 |
SHG73083.1 | SHG73041.1 | SAMN04488116_2294 | SAMN04488116_2292 | Hypothetical protein. | LytTr DNA-binding domain-containing protein. | 0.537 |
SHG73083.1 | SHG73067.1 | SAMN04488116_2294 | SAMN04488116_2293 | Hypothetical protein. | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | 0.932 |
SHG73083.1 | SHG73115.1 | SAMN04488116_2294 | SAMN04488116_2295 | Hypothetical protein. | Metal binding domain of Ada; Manually curated. | 0.937 |
SHG73083.1 | SHG73133.1 | SAMN04488116_2294 | SAMN04488116_2296 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SHG73083.1 | SHG73155.1 | SAMN04488116_2294 | SAMN04488116_2297 | Hypothetical protein. | Protein N-acetyltransferase, RimJ/RimL family. | 0.568 |
SHG73115.1 | SHG73041.1 | SAMN04488116_2295 | SAMN04488116_2292 | Metal binding domain of Ada; Manually curated. | LytTr DNA-binding domain-containing protein. | 0.537 |
SHG73115.1 | SHG73067.1 | SAMN04488116_2295 | SAMN04488116_2293 | Metal binding domain of Ada; Manually curated. | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | 0.863 |
SHG73115.1 | SHG73083.1 | SAMN04488116_2295 | SAMN04488116_2294 | Metal binding domain of Ada; Manually curated. | Hypothetical protein. | 0.937 |
SHG73115.1 | SHG73133.1 | SAMN04488116_2295 | SAMN04488116_2296 | Metal binding domain of Ada; Manually curated. | Hypothetical protein. | 0.773 |
SHG73115.1 | SHG73155.1 | SAMN04488116_2295 | SAMN04488116_2297 | Metal binding domain of Ada; Manually curated. | Protein N-acetyltransferase, RimJ/RimL family. | 0.568 |
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