Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG21041.1 | SHG75130.1 | SAMN04488116_0300 | SAMN04488116_2385 | FecR family protein. | Iron complex outermembrane recepter protein. | 0.491 |
SHG56129.1 | SHG75130.1 | SAMN04488116_1771 | SAMN04488116_2385 | Amidohydrolase family protein. | Iron complex outermembrane recepter protein. | 0.666 |
SHG74952.1 | SHG74974.1 | SAMN04488116_2378 | SAMN04488116_2379 | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | Hypothetical protein. | 0.994 |
SHG74952.1 | SHG74998.1 | SAMN04488116_2378 | SAMN04488116_2380 | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | Cytosine permease. | 0.948 |
SHG74952.1 | SHG75027.1 | SAMN04488116_2378 | SAMN04488116_2381 | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | Hypothetical protein. | 0.773 |
SHG74952.1 | SHG75052.1 | SAMN04488116_2378 | SAMN04488116_2382 | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | Allantoin racemase. | 0.887 |
SHG74952.1 | SHG75077.1 | SAMN04488116_2378 | SAMN04488116_2383 | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | N-methylhydantoinase B. | 0.997 |
SHG74952.1 | SHG75104.1 | SAMN04488116_2378 | SAMN04488116_2384 | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | N-methylhydantoinase A. | 0.793 |
SHG74952.1 | SHG75130.1 | SAMN04488116_2378 | SAMN04488116_2385 | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | Iron complex outermembrane recepter protein. | 0.475 |
SHG74974.1 | SHG74952.1 | SAMN04488116_2379 | SAMN04488116_2378 | Hypothetical protein. | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | 0.994 |
SHG74974.1 | SHG74998.1 | SAMN04488116_2379 | SAMN04488116_2380 | Hypothetical protein. | Cytosine permease. | 0.973 |
SHG74974.1 | SHG75027.1 | SAMN04488116_2379 | SAMN04488116_2381 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SHG74974.1 | SHG75052.1 | SAMN04488116_2379 | SAMN04488116_2382 | Hypothetical protein. | Allantoin racemase. | 0.876 |
SHG74974.1 | SHG75077.1 | SAMN04488116_2379 | SAMN04488116_2383 | Hypothetical protein. | N-methylhydantoinase B. | 0.890 |
SHG74974.1 | SHG75104.1 | SAMN04488116_2379 | SAMN04488116_2384 | Hypothetical protein. | N-methylhydantoinase A. | 0.924 |
SHG74974.1 | SHG75130.1 | SAMN04488116_2379 | SAMN04488116_2385 | Hypothetical protein. | Iron complex outermembrane recepter protein. | 0.475 |
SHG74998.1 | SHG74952.1 | SAMN04488116_2380 | SAMN04488116_2378 | Cytosine permease. | N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit. | 0.948 |
SHG74998.1 | SHG74974.1 | SAMN04488116_2380 | SAMN04488116_2379 | Cytosine permease. | Hypothetical protein. | 0.973 |
SHG74998.1 | SHG75027.1 | SAMN04488116_2380 | SAMN04488116_2381 | Cytosine permease. | Hypothetical protein. | 0.773 |
SHG74998.1 | SHG75052.1 | SAMN04488116_2380 | SAMN04488116_2382 | Cytosine permease. | Allantoin racemase. | 0.884 |
page 1 of 4