Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG45150.1 | SHG76495.1 | SAMN04488116_1268 | SAMN04488116_2443 | Predicted dehydrogenase. | Protein of unknown function. | 0.545 |
SHG45150.1 | SHG76694.1 | SAMN04488116_1268 | SAMN04488116_2451 | Predicted dehydrogenase. | Sugar phosphate isomerase/epimerase. | 0.542 |
SHG45150.1 | SHG77137.1 | SAMN04488116_1268 | SAMN04488116_2470 | Predicted dehydrogenase. | Oxidoreductase family, C-terminal alpha/beta domain. | 0.685 |
SHG76495.1 | SHG45150.1 | SAMN04488116_2443 | SAMN04488116_1268 | Protein of unknown function. | Predicted dehydrogenase. | 0.545 |
SHG76495.1 | SHG76595.1 | SAMN04488116_2443 | SAMN04488116_2447 | Protein of unknown function. | Predicted dehydrogenase. | 0.440 |
SHG76495.1 | SHG76647.1 | SAMN04488116_2443 | SAMN04488116_2449 | Protein of unknown function. | Nucleoside transporter. | 0.619 |
SHG76495.1 | SHG76694.1 | SAMN04488116_2443 | SAMN04488116_2451 | Protein of unknown function. | Sugar phosphate isomerase/epimerase. | 0.542 |
SHG76495.1 | SHG76724.1 | SAMN04488116_2443 | SAMN04488116_2452 | Protein of unknown function. | Choline dehydrogenase. | 0.622 |
SHG76495.1 | SHG76743.1 | SAMN04488116_2443 | SAMN04488116_2453 | Protein of unknown function. | Gluconate 2-dehydrogenase subunit 3. | 0.543 |
SHG76495.1 | SHG77137.1 | SAMN04488116_2443 | SAMN04488116_2470 | Protein of unknown function. | Oxidoreductase family, C-terminal alpha/beta domain. | 0.774 |
SHG76595.1 | SHG76495.1 | SAMN04488116_2447 | SAMN04488116_2443 | Predicted dehydrogenase. | Protein of unknown function. | 0.440 |
SHG76595.1 | SHG76620.1 | SAMN04488116_2447 | SAMN04488116_2448 | Predicted dehydrogenase. | Fucose permease. | 0.788 |
SHG76595.1 | SHG76647.1 | SAMN04488116_2447 | SAMN04488116_2449 | Predicted dehydrogenase. | Nucleoside transporter. | 0.810 |
SHG76595.1 | SHG76673.1 | SAMN04488116_2447 | SAMN04488116_2450 | Predicted dehydrogenase. | Uncharacterized damage-inducible protein DinB (forms a four-helix bundle). | 0.694 |
SHG76595.1 | SHG76694.1 | SAMN04488116_2447 | SAMN04488116_2451 | Predicted dehydrogenase. | Sugar phosphate isomerase/epimerase. | 0.826 |
SHG76595.1 | SHG76724.1 | SAMN04488116_2447 | SAMN04488116_2452 | Predicted dehydrogenase. | Choline dehydrogenase. | 0.718 |
SHG76595.1 | SHG76743.1 | SAMN04488116_2447 | SAMN04488116_2453 | Predicted dehydrogenase. | Gluconate 2-dehydrogenase subunit 3. | 0.695 |
SHG76620.1 | SHG76595.1 | SAMN04488116_2448 | SAMN04488116_2447 | Fucose permease. | Predicted dehydrogenase. | 0.788 |
SHG76620.1 | SHG76647.1 | SAMN04488116_2448 | SAMN04488116_2449 | Fucose permease. | Nucleoside transporter. | 0.718 |
SHG76620.1 | SHG76673.1 | SAMN04488116_2448 | SAMN04488116_2450 | Fucose permease. | Uncharacterized damage-inducible protein DinB (forms a four-helix bundle). | 0.714 |
page 1 of 4