Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG82805.1 | SHG82825.1 | SAMN04488116_2584 | SAMN04488116_2585 | Ergothioneine biosynthesis protein EgtB. | HAMP domain-containing protein. | 0.655 |
SHG82805.1 | SHG82859.1 | SAMN04488116_2584 | SAMN04488116_2586 | Ergothioneine biosynthesis protein EgtB. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.655 |
SHG82805.1 | SHG82887.1 | SAMN04488116_2584 | SAMN04488116_2587 | Ergothioneine biosynthesis protein EgtB. | Repeat-containing protein. | 0.411 |
SHG82825.1 | SHG82805.1 | SAMN04488116_2585 | SAMN04488116_2584 | HAMP domain-containing protein. | Ergothioneine biosynthesis protein EgtB. | 0.655 |
SHG82825.1 | SHG82859.1 | SAMN04488116_2585 | SAMN04488116_2586 | HAMP domain-containing protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.992 |
SHG82825.1 | SHG82887.1 | SAMN04488116_2585 | SAMN04488116_2587 | HAMP domain-containing protein. | Repeat-containing protein. | 0.480 |
SHG82859.1 | SHG82805.1 | SAMN04488116_2586 | SAMN04488116_2584 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Ergothioneine biosynthesis protein EgtB. | 0.655 |
SHG82859.1 | SHG82825.1 | SAMN04488116_2586 | SAMN04488116_2585 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | HAMP domain-containing protein. | 0.992 |
SHG82859.1 | SHG82887.1 | SAMN04488116_2586 | SAMN04488116_2587 | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | Repeat-containing protein. | 0.474 |
SHG82887.1 | SHG82805.1 | SAMN04488116_2587 | SAMN04488116_2584 | Repeat-containing protein. | Ergothioneine biosynthesis protein EgtB. | 0.411 |
SHG82887.1 | SHG82825.1 | SAMN04488116_2587 | SAMN04488116_2585 | Repeat-containing protein. | HAMP domain-containing protein. | 0.480 |
SHG82887.1 | SHG82859.1 | SAMN04488116_2587 | SAMN04488116_2586 | Repeat-containing protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.474 |