STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG83094.1cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases. (187 aa)    
Predicted Functional Partners:
SHG22069.1
Signal transduction histidine kinase.
 
 0.820
SHH06420.1
Glutamate synthase (ferredoxin).
    
 0.814
SHG22053.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.804
SHG56175.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
  
     0.775
SHG31994.1
Hypothetical protein.
   
 0.616
SHG83016.1
Hypothetical protein.
       0.584
SHG83046.1
Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily.
       0.584
SHG83066.1
Hypothetical protein.
       0.584
SHG49701.1
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
  0.574
SHG82990.1
DinB superfamily protein.
 
     0.530
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.