STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG84039.1Hypothetical protein. (156 aa)    
Predicted Functional Partners:
SHG84056.1
Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
       0.773
SHG84081.1
5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.
       0.773
SHG84013.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
       0.757
SHG73115.1
Metal binding domain of Ada; Manually curated.
  
     0.651
SHG70963.1
Starch-binding associating with outer membrane.
  
     0.624
SHG84099.1
Lipid A 3-O-deacylase (PagL).
       0.566
SHG84128.1
Putative auto-transporter adhesin, head GIN domain.
       0.545
SHG99649.1
Glucose-1-phosphate thymidylyltransferase.
  
     0.537
SHG23516.1
Bacteriocin-protection, YdeI or OmpD-Associated.
  
     0.518
SHG67243.1
DUF4097 and DUF4098 domain-containing protein YvlB.
  
     0.500
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.