STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG86187.1Two component transcriptional regulator, LytTR family. (247 aa)    
Predicted Functional Partners:
SHG86203.1
Histidine kinase.
 
   0.953
SHH08088.1
GAF domain-containing protein.
 
 
  0.858
SHG51900.1
Histidine kinase.
  
  0.822
SHG30275.1
Histidine kinase.
  
  0.819
SHG29352.1
Histidine kinase.
  
   0.803
SHG68727.1
Histidine kinase.
  
   0.803
SHG98020.1
Histidine kinase.
  
   0.803
SHH06210.1
Histidine kinase.
  
   0.803
SHG16306.1
Histidine kinase.
  
   0.802
SHG30609.1
Histidine kinase.
  
   0.801
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.