STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG91314.1CotH protein. (468 aa)    
Predicted Functional Partners:
SHG91269.1
Aldose 1-epimerase.
    
  0.820
SHG91295.1
Glutamate carboxypeptidase.
       0.773
SHG91338.1
Cystathionine beta-synthase.
       0.661
SHG71918.1
LytTr DNA-binding domain-containing protein.
  
     0.523
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
 
      0.470
SHG91361.1
Lipoprotein-releasing system permease protein.
       0.426
SHG82727.1
Glycogen recognition site of AMP-activated protein kinase.
  
  
  0.415
SHG48825.1
Fructan beta-fructosidase; Belongs to the glycosyl hydrolase 32 family.
   
 
  0.407
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.