STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG92097.1Protein of unknown function. (317 aa)    
Predicted Functional Partners:
SHG92015.1
FAD dependent oxidoreductase.
  
    0.803
SHG92060.1
N-acylglucosamine 2-epimerase; Non-canonical start codon; manually curated.
       0.792
SHG92039.1
Uncharacterized lipoprotein YddW, UPF0748 family.
       0.774
SHG92116.1
Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.773
SHG91996.1
Hypothetical protein; Manually curated.
       0.510
SHG22053.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
   0.422
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.