Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHG22113.1 | SHG97346.1 | SAMN04488116_0366 | SAMN04488116_3095 | Uncharacterized membrane protein YphA, DoxX/SURF4 family. | Cupin domain-containing protein. | 0.482 |
SHG36076.1 | SHG97346.1 | SAMN04488116_1155 | SAMN04488116_3095 | Membrane protein involved in the export of O-antigen and teichoic acid. | Cupin domain-containing protein. | 0.567 |
SHG97327.1 | SHG97346.1 | SAMN04488116_3094 | SAMN04488116_3095 | Transcriptional regulator, TetR family. | Cupin domain-containing protein. | 0.561 |
SHG97346.1 | SHG22113.1 | SAMN04488116_3095 | SAMN04488116_0366 | Cupin domain-containing protein. | Uncharacterized membrane protein YphA, DoxX/SURF4 family. | 0.482 |
SHG97346.1 | SHG36076.1 | SAMN04488116_3095 | SAMN04488116_1155 | Cupin domain-containing protein. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.567 |
SHG97346.1 | SHG97327.1 | SAMN04488116_3095 | SAMN04488116_3094 | Cupin domain-containing protein. | Transcriptional regulator, TetR family. | 0.561 |