STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH00624.1Voltage-gated potassium channel. (339 aa)    
Predicted Functional Partners:
SHH00608.1
Phage shock protein C (PspC) family protein.
       0.810
SHH00583.1
Protein of unknown function.
       0.794
SHG86402.1
Trk system potassium uptake protein TrkH.
  
 
 0.714
SHH02708.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
 0.675
SHH00648.1
Alanine or glycine:cation symporter, AGCS family.
       0.569
SHH00670.1
DNA uptake protein ComE.
       0.563
SHG73651.1
Molybdopterin synthase catalytic subunit.
   
    0.553
SHH00686.1
Acyl-CoA dehydrogenase.
       0.484
SHG22053.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.474
SHH00562.1
Rhodanese-related sulfurtransferase.
       0.463
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.