STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH01123.1Hypothetical protein; Partial gene; manually curated. (174 aa)    
Predicted Functional Partners:
SHH02040.1
Hypothetical protein.
 
      0.899
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.750
SHH02708.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.699
SHG18411.1
Lysophospholipase L1.
   
  0.557
SHG33636.1
Lysophospholipase L1.
   
  0.557
SHG43565.1
Lysophospholipase L1.
   
  0.557
SHH02820.1
Sialate O-acetylesterase.
   
  0.557
SHG54556.1
Cysteine-rich secretory protein family protein.
   
    0.548
SHG44701.1
GSCFA family protein.
   
  0.522
SHG82397.1
Hypothetical protein.
   
  0.522
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.