STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH05305.1Histidine kinase. (352 aa)    
Predicted Functional Partners:
SHH05286.1
Two component transcriptional regulator, LytTR family.
 
   0.953
SHG22069.1
Signal transduction histidine kinase.
 
 
    0.874
SHG51882.1
Two component transcriptional regulator, LytTR family.
  
  0.807
SHG30294.1
Two component transcriptional regulator, LytTR family.
  
  0.804
SHG71063.1
Two component transcriptional regulator, LytTR family.
  
   0.803
SHG98001.1
Two component transcriptional regulator, LytTR family.
  
   0.803
SHG22406.1
Two component transcriptional regulator, LytTR family.
  
  0.802
SHH06289.1
Two component transcriptional regulator, LytTR family.
  
   0.802
SHG29367.1
Two component transcriptional regulator, LytTR family.
  
   0.801
SHG16288.1
Two component transcriptional regulator, LytTR family.
  
   0.800
Your Current Organism:
Flagellimonas flava
NCBI taxonomy Id: 570519
Other names: DSM 22638, F. flava, Flavobacteriaceae bacterium A11, KCTC 22665, Spongiibacterium flavum, Spongiibacterium flavum Yoon et al. 2012, strain A11
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.