STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI40524.1Pimeloyl-ACP methyl ester carboxylesterase. (286 aa)    
Predicted Functional Partners:
SHI47085.1
4Fe-4S dicluster domain-containing protein.
  
   0.809
SHJ05653.1
Amino acid adenylation domain-containing protein.
 
 
 0.757
SHJ70680.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
   
 0.744
SHJ23416.1
Glycerophosphoryl diester phosphodiesterase.
    
 0.608
SHJ55910.1
Hypothetical protein.
  
     0.602
SHI40476.1
Peptide-methionine (R)-S-oxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
       0.572
SHI40502.1
Peptide-methionine (R)-S-oxide reductase.
       0.572
SHJ71295.1
Amino acid adenylation domain-containing protein.
   
 0.515
SHJ71318.1
Amino acid adenylation domain-containing protein.
   
 0.515
SHI40457.1
Hypothetical protein.
       0.514
Your Current Organism:
Aquimarina spongiae
NCBI taxonomy Id: 570521
Other names: A. spongiae, Aquimarina spongiae Yoon et al. 2011 emend. Park et al. 2013, DSM 22623, Flavobacteriaceae bacterium A6, KCTC 22663, strain A6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.