STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI47466.1N-terminal double-transmembrane domain-containing protein. (643 aa)    
Predicted Functional Partners:
SHI62101.1
Magnesium chelatase subunit I.
  
 0.847
SHI47486.1
Dihydroorotase.
       0.818
SHJ61080.1
Protein of unknown function DUF58.
 
  
 0.788
SHI38385.1
Hypothetical protein.
 
     0.782
SHI32249.1
Protein of unknown function.
 
     0.780
SHI95305.1
Hypothetical protein.
  
     0.775
SHJ66734.1
Tetratricopeptide repeat-containing protein.
 
     0.774
SHI66882.1
Hypothetical protein.
  
     0.769
SHI47504.1
Uncharacterized membrane protein.
 
     0.716
SHI66845.1
DKNYY family protein.
   
   0.654
Your Current Organism:
Aquimarina spongiae
NCBI taxonomy Id: 570521
Other names: A. spongiae, Aquimarina spongiae Yoon et al. 2011 emend. Park et al. 2013, DSM 22623, Flavobacteriaceae bacterium A6, KCTC 22663, strain A6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.