STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI60200.1Aminoglycoside 6'-N-acetyltransferase. (165 aa)    
Predicted Functional Partners:
SHI60224.1
Hypothetical protein.
 
     0.775
SHI60241.1
Protein of unknown function.
       0.641
SHI71048.1
Glutamate synthase (NADH) large subunit.
   
 
  0.621
SHI78633.1
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase.
    
  0.613
SHI84998.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.601
SHI49222.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.582
SHI62233.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
  
     0.517
SHI60167.1
Transcriptional regulator, AraC family.
       0.500
SHI60267.1
Polyketide cyclase / dehydrase and lipid transport.
       0.453
SHJ39833.1
Lysine N6-hydroxylase.
  
 
  0.449
Your Current Organism:
Aquimarina spongiae
NCBI taxonomy Id: 570521
Other names: A. spongiae, Aquimarina spongiae Yoon et al. 2011 emend. Park et al. 2013, DSM 22623, Flavobacteriaceae bacterium A6, KCTC 22663, strain A6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.