STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ21464.1Curli production assembly/transport component CsgG. (490 aa)    
Predicted Functional Partners:
SHJ21443.1
Curli production assembly/transport component CsgF.
 
 
 0.997
SHJ21496.1
Carboxypeptidase regulatory-like domain-containing protein.
 
    0.924
SHJ21356.1
Curlin associated repeat-containing protein.
 
  
 0.878
SHJ21416.1
Curli assembly protein CsgE.
       0.603
SHJ06911.1
Hypothetical protein.
  
     0.543
SHJ21379.1
Hypothetical protein.
       0.500
SHJ21527.1
Phosphoribosylformylglycinamidine cyclo-ligase.
       0.437
Your Current Organism:
Aquimarina spongiae
NCBI taxonomy Id: 570521
Other names: A. spongiae, Aquimarina spongiae Yoon et al. 2011 emend. Park et al. 2013, DSM 22623, Flavobacteriaceae bacterium A6, KCTC 22663, strain A6
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.