STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ22346.1Acyl-CoA-binding protein. (88 aa)    
Predicted Functional Partners:
SHJ22421.1
Uncharacterised ACR, YkgG family COG1556.
 
     0.830
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
       0.818
SHJ22389.1
Phosphatidate cytidylyltransferase.
       0.815
SHJ55910.1
Hypothetical protein.
  
     0.770
SHI49761.1
Hypothetical protein.
  
     0.751
SHI69933.1
Protein of unknown function.
  
     0.742
SHJ38399.1
ATPase family associated with various cellular activities (AAA).
     
 0.736
SHJ27528.1
Hypothetical protein.
  
     0.723
SHI69968.1
Hypothetical protein.
  
     0.722
SHI83594.1
Outer membrane protein beta-barrel domain-containing protein.
  
     0.710
Your Current Organism:
Aquimarina spongiae
NCBI taxonomy Id: 570521
Other names: A. spongiae, Aquimarina spongiae Yoon et al. 2011 emend. Park et al. 2013, DSM 22623, Flavobacteriaceae bacterium A6, KCTC 22663, strain A6
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.