STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ36464.1Oxidoreductase alpha (molybdopterin) subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (765 aa)    
Predicted Functional Partners:
SHI82407.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
  
 0.994
SHI82381.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 1.
  
 0.986
SHI82425.1
Quinol:cytochrome c oxidoreductase pentaheme cytochrome subunit.
   
 0.985
SHI71048.1
Glutamate synthase (NADH) large subunit.
  
 0.925
SHI82322.1
Quinol:cytochrome c oxidoreductase quinone-binding subunit 2.
   
 
 0.844
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.844
SHI84998.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.833
SHJ06300.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
 
0.826
SHI31832.1
Planctomycete cytochrome C.
 
 0.810
SHI82035.1
Allosteric NADP-dependent malic enzyme.
    
 0.791
Your Current Organism:
Aquimarina spongiae
NCBI taxonomy Id: 570521
Other names: A. spongiae, Aquimarina spongiae Yoon et al. 2011 emend. Park et al. 2013, DSM 22623, Flavobacteriaceae bacterium A6, KCTC 22663, strain A6
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