STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ40279.1Exo-beta-1,3-glucanase, GH17 family. (428 aa)    
Predicted Functional Partners:
SHJ40298.1
Hypothetical protein.
 
     0.952
SHJ40263.1
Glucosylceramidase; Belongs to the glycosyl hydrolase 30 family.
 
     0.949
SHJ40240.1
Glycoside/pentoside/hexuronide:cation symporter, GPH family.
 
     0.947
SHJ40221.1
Exo-beta-1,3-glucanase, GH17 family.
 
     0.933
SHJ40381.1
Glycosyl hydrolases family 2, TIM barrel domain.
 
     0.864
SHJ40359.1
Hypothetical protein.
 
     0.837
SHJ40314.1
PKD domain-containing protein.
 
     0.828
SHJ40337.1
Glycosyl hydrolases family 16.
     0.736
SHJ40401.1
Regulatory protein, luxR family.
 
     0.701
SHJ40208.1
Transcriptional regulator, BadM/Rrf2 family.
       0.435
Your Current Organism:
Aquimarina spongiae
NCBI taxonomy Id: 570521
Other names: A. spongiae, Aquimarina spongiae Yoon et al. 2011 emend. Park et al. 2013, DSM 22623, Flavobacteriaceae bacterium A6, KCTC 22663, strain A6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.