Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHJ38399.1 | SHJ38424.1 | SAMN04488508_10889 | SAMN04488508_10890 | ATPase family associated with various cellular activities (AAA). | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | 0.837 |
SHJ38399.1 | SHJ38448.1 | SAMN04488508_10889 | SAMN04488508_10891 | ATPase family associated with various cellular activities (AAA). | Hypothetical protein. | 0.933 |
SHJ38399.1 | SHJ38473.1 | SAMN04488508_10889 | SAMN04488508_10892 | ATPase family associated with various cellular activities (AAA). | Hypothetical protein. | 0.923 |
SHJ38399.1 | SHJ38497.1 | SAMN04488508_10889 | SAMN04488508_10893 | ATPase family associated with various cellular activities (AAA). | Hypothetical protein. | 0.593 |
SHJ38399.1 | SHJ38527.1 | SAMN04488508_10889 | SAMN04488508_10894 | ATPase family associated with various cellular activities (AAA). | N-terminal domain of galactosyltransferase. | 0.593 |
SHJ38399.1 | SHJ38608.1 | SAMN04488508_10889 | SAMN04488508_10898 | ATPase family associated with various cellular activities (AAA). | Protein of unknown function. | 0.855 |
SHJ38399.1 | SHJ38632.1 | SAMN04488508_10889 | SAMN04488508_10899 | ATPase family associated with various cellular activities (AAA). | Hypothetical protein. | 0.850 |
SHJ38399.1 | SHJ38654.1 | SAMN04488508_10889 | SAMN04488508_108100 | ATPase family associated with various cellular activities (AAA). | Baseplate J-like protein. | 0.850 |
SHJ38399.1 | SHJ38671.1 | SAMN04488508_10889 | SAMN04488508_108101 | ATPase family associated with various cellular activities (AAA). | Hypothetical protein. | 0.848 |
SHJ38399.1 | SHJ38714.1 | SAMN04488508_10889 | SAMN04488508_108103 | ATPase family associated with various cellular activities (AAA). | Rhs element Vgr protein. | 0.874 |
SHJ38424.1 | SHJ38399.1 | SAMN04488508_10890 | SAMN04488508_10889 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | ATPase family associated with various cellular activities (AAA). | 0.837 |
SHJ38424.1 | SHJ38448.1 | SAMN04488508_10890 | SAMN04488508_10891 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | Hypothetical protein. | 0.789 |
SHJ38424.1 | SHJ38473.1 | SAMN04488508_10890 | SAMN04488508_10892 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | Hypothetical protein. | 0.741 |
SHJ38424.1 | SHJ38497.1 | SAMN04488508_10890 | SAMN04488508_10893 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | Hypothetical protein. | 0.593 |
SHJ38424.1 | SHJ38527.1 | SAMN04488508_10890 | SAMN04488508_10894 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | N-terminal domain of galactosyltransferase. | 0.593 |
SHJ38424.1 | SHJ38608.1 | SAMN04488508_10890 | SAMN04488508_10898 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | Protein of unknown function. | 0.665 |
SHJ38424.1 | SHJ38632.1 | SAMN04488508_10890 | SAMN04488508_10899 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | Hypothetical protein. | 0.549 |
SHJ38424.1 | SHJ38654.1 | SAMN04488508_10890 | SAMN04488508_108100 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | Baseplate J-like protein. | 0.570 |
SHJ38424.1 | SHJ38671.1 | SAMN04488508_10890 | SAMN04488508_108101 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | Hypothetical protein. | 0.532 |
SHJ38424.1 | SHJ38714.1 | SAMN04488508_10890 | SAMN04488508_108103 | Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases-containing protein. | Rhs element Vgr protein. | 0.560 |
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