STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ49379.1Uncharacterized conserved protein, DUF849 family. (289 aa)    
Predicted Functional Partners:
SHJ49456.1
Acyl-CoA dehydrogenase.
 
     0.793
SHJ49408.1
Citronellol/citronellal dehydrogenase.
  
    0.776
SHJ49435.1
Acyl-CoA dehydrogenase.
       0.773
SHJ49365.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
      0.738
SHJ49338.1
3-methylcrotonoyl-CoA carboxylase, alpha subunit.
       0.703
SHJ49479.1
Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family.
       0.694
SHJ49272.1
Long-chain acyl-CoA synthetase (AMP-forming).
       0.649
SHJ49291.1
Hypothetical protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.641
SHJ49310.1
Acetyl-CoA carboxylase, carboxyltransferase component.
       0.641
SHJ07932.1
Kynurenine formamidase.
 
    0.633
Your Current Organism:
Aquimarina spongiae
NCBI taxonomy Id: 570521
Other names: A. spongiae, Aquimarina spongiae Yoon et al. 2011 emend. Park et al. 2013, DSM 22623, Flavobacteriaceae bacterium A6, KCTC 22663, strain A6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.