STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHJ70211.1Signal transduction histidine kinase. (721 aa)    
Predicted Functional Partners:
SHJ70265.1
Two component transcriptional regulator, LuxR family.
 
  0.929
SHJ55972.1
Two component transcriptional regulator, LuxR family.
  
  0.850
SHJ53794.1
Two component transcriptional regulator, LuxR family.
  
  0.848
SHI76346.1
Two component transcriptional regulator, LuxR family.
  
  0.845
SHI78309.1
Two component transcriptional regulator, LuxR family.
  
  0.844
SHJ62622.1
Two component transcriptional regulator, LuxR family.
  
  0.841
SHI69385.1
Two component transcriptional regulator, LuxR family.
  
  0.839
SHJ06153.1
Two component transcriptional regulator, LuxR family.
  
  0.839
SHJ23318.1
Two component transcriptional regulator, LuxR family.
  
  0.829
SHI83523.1
Two component transcriptional regulator, LuxR family.
  
  0.826
Your Current Organism:
Aquimarina spongiae
NCBI taxonomy Id: 570521
Other names: A. spongiae, Aquimarina spongiae Yoon et al. 2011 emend. Park et al. 2013, DSM 22623, Flavobacteriaceae bacterium A6, KCTC 22663, strain A6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.