STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS36685.1Post-transcriptional regulator. (91 aa)    
Predicted Functional Partners:
secF
Protein translocase subunit secF /protein translocase subunit secD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
 
    0.788
ftsL
Cell division protein FtsL; Essential cell division protein; Belongs to the FtsL family.
  
    0.765
SIS42810.1
RNA polymerase sigma factor, sigma-70 family; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.755
SIS36880.1
Hypothetical protein.
  
    0.749
SIS36882.1
Hypothetical protein.
  
    0.741
SIS65224.1
Protein of unknown function.
  
     0.732
SIS50961.1
Hypothetical protein.
  
     0.730
SIS37222.1
Protein of unknown function.
  
     0.719
SIS36930.1
Hypothetical protein.
  
     0.716
SIS36914.1
Competence protein ComGD.
  
     0.707
Your Current Organism:
Salimicrobium flavidum
NCBI taxonomy Id: 570947
Other names: CCUG 56755, DSM 23127, KCTC 13260, S. flavidum, Salimicrobium flavidum Yoon et al. 2009, Salimicrobium sp. ISL-25, strain ISL-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.