STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS41027.1YolD-like protein. (112 aa)    
Predicted Functional Partners:
SIS56951.1
Hypothetical protein.
  
     0.748
SIS56971.1
HlyD family secretion protein.
  
     0.745
SIS40954.1
Acetyltransferase (GNAT) family protein.
  
     0.736
SIS37203.1
Uncharacterized protein YpmB.
  
     0.711
SIS45160.1
Hypothetical protein.
  
     0.710
SIS40989.1
Hypothetical protein.
  
     0.706
SIS38522.1
Uncharacterized membrane protein YccC.
  
     0.691
SIS48836.1
Hypothetical protein.
  
     0.667
SIS47602.1
Hypothetical protein.
 
    0.660
SIS37005.1
Uncharacterized protein YqkB; Belongs to the HesB/IscA family.
 
     0.642
Your Current Organism:
Salimicrobium flavidum
NCBI taxonomy Id: 570947
Other names: CCUG 56755, DSM 23127, KCTC 13260, S. flavidum, Salimicrobium flavidum Yoon et al. 2009, Salimicrobium sp. ISL-25, strain ISL-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.