STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS41276.1Conserved hypothetical integral membrane protein. (77 aa)    
Predicted Functional Partners:
SIS36737.1
Protein of unknown function.
  
     0.692
SIS47455.1
Gas vesicle protein.
  
     0.660
SIS37159.1
Uncharacterized protein YpiB, UPF0302 family; Belongs to the UPF0302 family.
  
     0.619
SIS43296.1
Tetratricopeptide repeat-containing protein.
  
     0.617
SIS37034.1
Riboflavin biosynthesis RibT protein.
  
     0.605
SIS38229.1
YkyB-like protein.
  
     0.579
SIS41217.1
ATP synthase protein I.
 
    0.567
SIS48651.1
Uncharacterized membrane protein YgaE, UPF0421/DUF939 family.
  
     0.564
SIS65568.1
Protein involved in sex pheromone biosynthesis.
  
     0.556
SIS36649.1
Rod shape-determining protein MreD.
  
     0.542
Your Current Organism:
Salimicrobium flavidum
NCBI taxonomy Id: 570947
Other names: CCUG 56755, DSM 23127, KCTC 13260, S. flavidum, Salimicrobium flavidum Yoon et al. 2009, Salimicrobium sp. ISL-25, strain ISL-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.