Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS39737.1 | SIS39742.1 | SAMN05421687_10245 | SAMN05421687_10246 | Arsenical resistance operon trans-acting repressor ArsD. | Arsenite efflux ATP-binding protein ArsA. | 0.956 |
SIS39737.1 | SIS39745.1 | SAMN05421687_10245 | SAMN05421687_10247 | Arsenical resistance operon trans-acting repressor ArsD. | Fe-S cluster assembly iron-binding protein IscA; Belongs to the HesB/IscA family. | 0.807 |
SIS39737.1 | SIS40244.1 | SAMN05421687_10245 | SAMN05421687_102155 | Arsenical resistance operon trans-acting repressor ArsD. | Glyoxylase, beta-lactamase superfamily II. | 0.753 |
SIS39737.1 | SIS40287.1 | SAMN05421687_10245 | SAMN05421687_102164 | Arsenical resistance operon trans-acting repressor ArsD. | Hydroxyacylglutathione hydrolase. | 0.753 |
SIS39737.1 | SIS47275.1 | SAMN05421687_10245 | SAMN05421687_10567 | Arsenical resistance operon trans-acting repressor ArsD. | Glutamate synthase (NADH) small subunit. | 0.767 |
SIS39737.1 | SIS51663.1 | SAMN05421687_10245 | SAMN05421687_10792 | Arsenical resistance operon trans-acting repressor ArsD. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.871 |
SIS39737.1 | icmF | SAMN05421687_10245 | SAMN05421687_102308 | Arsenical resistance operon trans-acting repressor ArsD. | methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly. | 0.871 |
SIS39737.1 | ldh | SAMN05421687_10245 | SAMN05421687_101120 | Arsenical resistance operon trans-acting repressor ArsD. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.797 |
SIS39737.1 | ldh-2 | SAMN05421687_10245 | SAMN05421687_1109 | Arsenical resistance operon trans-acting repressor ArsD. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.797 |
SIS39737.1 | mdh | SAMN05421687_10245 | SAMN05421687_10788 | Arsenical resistance operon trans-acting repressor ArsD. | Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.797 |
SIS39742.1 | SIS39737.1 | SAMN05421687_10246 | SAMN05421687_10245 | Arsenite efflux ATP-binding protein ArsA. | Arsenical resistance operon trans-acting repressor ArsD. | 0.956 |
SIS39742.1 | SIS39745.1 | SAMN05421687_10246 | SAMN05421687_10247 | Arsenite efflux ATP-binding protein ArsA. | Fe-S cluster assembly iron-binding protein IscA; Belongs to the HesB/IscA family. | 0.818 |
SIS39745.1 | SIS39737.1 | SAMN05421687_10247 | SAMN05421687_10245 | Fe-S cluster assembly iron-binding protein IscA; Belongs to the HesB/IscA family. | Arsenical resistance operon trans-acting repressor ArsD. | 0.807 |
SIS39745.1 | SIS39742.1 | SAMN05421687_10247 | SAMN05421687_10246 | Fe-S cluster assembly iron-binding protein IscA; Belongs to the HesB/IscA family. | Arsenite efflux ATP-binding protein ArsA. | 0.818 |
SIS40244.1 | SIS39737.1 | SAMN05421687_102155 | SAMN05421687_10245 | Glyoxylase, beta-lactamase superfamily II. | Arsenical resistance operon trans-acting repressor ArsD. | 0.753 |
SIS40244.1 | SIS40287.1 | SAMN05421687_102155 | SAMN05421687_102164 | Glyoxylase, beta-lactamase superfamily II. | Hydroxyacylglutathione hydrolase. | 0.890 |
SIS40287.1 | SIS39737.1 | SAMN05421687_102164 | SAMN05421687_10245 | Hydroxyacylglutathione hydrolase. | Arsenical resistance operon trans-acting repressor ArsD. | 0.753 |
SIS40287.1 | SIS40244.1 | SAMN05421687_102164 | SAMN05421687_102155 | Hydroxyacylglutathione hydrolase. | Glyoxylase, beta-lactamase superfamily II. | 0.890 |
SIS47275.1 | SIS39737.1 | SAMN05421687_10567 | SAMN05421687_10245 | Glutamate synthase (NADH) small subunit. | Arsenical resistance operon trans-acting repressor ArsD. | 0.767 |
SIS47275.1 | ldh | SAMN05421687_10567 | SAMN05421687_101120 | Glutamate synthase (NADH) small subunit. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family. | 0.409 |
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