STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS45624.1Acetyl-CoA carboxylase, carboxyltransferase component. (509 aa)    
Predicted Functional Partners:
SIS45645.1
acetyl-CoA carboxylase, biotin carboxylase subunit.
 
 0.996
SIS45633.1
hydroxymethylglutaryl-CoA lyase.
 
 0.950
SIS43613.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.915
SIS45639.1
acetyl-CoA carboxylase biotin carboxyl carrier protein.
 
 0.912
SIS45629.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
 0.870
birA
Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
 
 
 0.839
SIS45658.1
Acyl-CoA dehydrogenase.
 
 
  0.813
SIS45648.1
fatty-acyl-CoA synthase.
  
  0.809
SIS40492.1
Glyoxalase family protein.
  
 
 0.787
SIS36983.1
methylmalonyl-CoA epimerase.
 
 
 0.716
Your Current Organism:
Salimicrobium flavidum
NCBI taxonomy Id: 570947
Other names: CCUG 56755, DSM 23127, KCTC 13260, S. flavidum, Salimicrobium flavidum Yoon et al. 2009, Salimicrobium sp. ISL-25, strain ISL-25
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