Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS39773.1 | SIS46173.1 | SAMN05421687_10253 | SAMN05421687_104249 | Diguanylate cyclase (GGDEF) domain-containing protein. | Hypothetical protein. | 0.413 |
SIS42470.1 | SIS46173.1 | SAMN05421687_10347 | SAMN05421687_104249 | Glycosyl hydrolases family 8. | Hypothetical protein. | 0.400 |
SIS46167.1 | SIS46173.1 | SAMN05421687_104248 | SAMN05421687_104249 | Hypothetical protein. | Hypothetical protein. | 0.568 |
SIS46167.1 | SIS46178.1 | SAMN05421687_104248 | SAMN05421687_104250 | Hypothetical protein. | Pseudouridine kinase. | 0.561 |
SIS46173.1 | SIS39773.1 | SAMN05421687_104249 | SAMN05421687_10253 | Hypothetical protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.413 |
SIS46173.1 | SIS42470.1 | SAMN05421687_104249 | SAMN05421687_10347 | Hypothetical protein. | Glycosyl hydrolases family 8. | 0.400 |
SIS46173.1 | SIS46167.1 | SAMN05421687_104249 | SAMN05421687_104248 | Hypothetical protein. | Hypothetical protein. | 0.568 |
SIS46173.1 | SIS46178.1 | SAMN05421687_104249 | SAMN05421687_104250 | Hypothetical protein. | Pseudouridine kinase. | 0.762 |
SIS46173.1 | SIS46186.1 | SAMN05421687_104249 | SAMN05421687_104251 | Hypothetical protein. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.421 |
SIS46178.1 | SIS46167.1 | SAMN05421687_104250 | SAMN05421687_104248 | Pseudouridine kinase. | Hypothetical protein. | 0.561 |
SIS46178.1 | SIS46173.1 | SAMN05421687_104250 | SAMN05421687_104249 | Pseudouridine kinase. | Hypothetical protein. | 0.762 |
SIS46178.1 | SIS46186.1 | SAMN05421687_104250 | SAMN05421687_104251 | Pseudouridine kinase. | Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | 0.551 |
SIS46186.1 | SIS46173.1 | SAMN05421687_104251 | SAMN05421687_104249 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | Hypothetical protein. | 0.421 |
SIS46186.1 | SIS46178.1 | SAMN05421687_104251 | SAMN05421687_104250 | Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides. | Pseudouridine kinase. | 0.551 |