STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS47592.1Protein of unknown function. (152 aa)    
Predicted Functional Partners:
SIS36857.1
Transglycosylase SLT domain-containing protein.
  
     0.757
SIS51493.1
Hypothetical protein.
  
     0.727
SIS40989.1
Hypothetical protein.
  
     0.690
SIS37353.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
  
     0.667
SIS43583.1
Hypothetical protein.
  
     0.665
SIS38522.1
Uncharacterized membrane protein YccC.
  
     0.637
SIS37639.1
Hook-length control protein FliK.
  
     0.576
SIS51859.1
Protein of unknown function.
  
     0.532
SIS52651.1
EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant).
  
     0.524
SIS47598.1
Competence protein ComK.
       0.522
Your Current Organism:
Salimicrobium flavidum
NCBI taxonomy Id: 570947
Other names: CCUG 56755, DSM 23127, KCTC 13260, S. flavidum, Salimicrobium flavidum Yoon et al. 2009, Salimicrobium sp. ISL-25, strain ISL-25
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.