STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS47694.1Protein of unknown function. (275 aa)    
Predicted Functional Partners:
SIS47700.1
Hypothetical protein.
       0.723
nnrD
NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]
   
    0.612
SIS40954.1
Acetyltransferase (GNAT) family protein.
  
     0.555
SIS45160.1
Hypothetical protein.
  
     0.550
SIS49034.1
Fibronectin-binding protein (FBP), N-terminal.
  
     0.549
SIS53858.1
Transglycosylase SLT domain-containing protein.
  
     0.540
SIS39856.1
5-methylcytosine-specific restriction endonuclease McrA.
  
     0.539
SIS47690.1
Scaffold protein Nfu/NifU N terminal.
       0.527
SIS60262.1
Siderophore synthetase component.
  
     0.517
SIS49620.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.513
Your Current Organism:
Salimicrobium flavidum
NCBI taxonomy Id: 570947
Other names: CCUG 56755, DSM 23127, KCTC 13260, S. flavidum, Salimicrobium flavidum Yoon et al. 2009, Salimicrobium sp. ISL-25, strain ISL-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.