STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS47772.1Oligopeptide transport system permease protein. (308 aa)    
Predicted Functional Partners:
SIS47776.1
Oligopeptide transport system permease protein.
 
 0.999
SIS47781.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 0.999
SIS47787.1
Oligopeptide transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.999
SIS47765.1
Oligopeptide transport system substrate-binding protein.
 
 0.998
SIS55047.1
Oligopeptide transport system substrate-binding protein.
 
 0.978
SIS39843.1
Peptide/nickel transport system permease protein.
  
 
 0.764
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.757
SIS39837.1
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
  
 
 0.752
SIS37065.1
Energy-coupling factor transport system substrate-specific component.
  
 
 0.486
SIS39892.1
Energy-coupling factor transport system ATP-binding protein.
  
 
 0.486
Your Current Organism:
Salimicrobium flavidum
NCBI taxonomy Id: 570947
Other names: CCUG 56755, DSM 23127, KCTC 13260, S. flavidum, Salimicrobium flavidum Yoon et al. 2009, Salimicrobium sp. ISL-25, strain ISL-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.