STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS48935.1Cysteine-rich secretory protein family protein. (615 aa)    
Predicted Functional Partners:
SIS42901.1
Accessory Sec system S-layer assembly protein.
  
 
   0.793
SIS37699.1
Hypothetical protein.
  
  
  0.790
SIS64883.1
Hypothetical protein.
  
     0.772
SIS42338.1
Protein of unknown function.
 
     0.768
SIS53858.1
Transglycosylase SLT domain-containing protein.
  
     0.763
SIS45204.1
ABC-2 type transport system permease protein.
  
     0.757
SIS50697.1
Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains.
  
     0.757
SIS45160.1
Hypothetical protein.
  
    0.747
SIS50594.1
Pilus assembly protein, PilO.
  
     0.741
SIS45753.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.732
Your Current Organism:
Salimicrobium flavidum
NCBI taxonomy Id: 570947
Other names: CCUG 56755, DSM 23127, KCTC 13260, S. flavidum, Salimicrobium flavidum Yoon et al. 2009, Salimicrobium sp. ISL-25, strain ISL-25
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.