Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS54817.1 | SIS54832.1 | SAMN05421687_10884 | SAMN05421687_10885 | Putative sporulation protein YyaC. | Small conductance mechanosensitive channel. | 0.443 |
SIS54817.1 | SIS54847.1 | SAMN05421687_10884 | SAMN05421687_10886 | Putative sporulation protein YyaC. | Hypothetical protein. | 0.481 |
SIS54832.1 | SIS54817.1 | SAMN05421687_10885 | SAMN05421687_10884 | Small conductance mechanosensitive channel. | Putative sporulation protein YyaC. | 0.443 |
SIS54832.1 | SIS54847.1 | SAMN05421687_10885 | SAMN05421687_10886 | Small conductance mechanosensitive channel. | Hypothetical protein. | 0.787 |
SIS54832.1 | ychF | SAMN05421687_10885 | SAMN05421687_10887 | Small conductance mechanosensitive channel. | Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.497 |
SIS54847.1 | SIS54817.1 | SAMN05421687_10886 | SAMN05421687_10884 | Hypothetical protein. | Putative sporulation protein YyaC. | 0.481 |
SIS54847.1 | SIS54832.1 | SAMN05421687_10886 | SAMN05421687_10885 | Hypothetical protein. | Small conductance mechanosensitive channel. | 0.787 |
SIS54847.1 | ychF | SAMN05421687_10886 | SAMN05421687_10887 | Hypothetical protein. | Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | 0.741 |
ychF | SIS54832.1 | SAMN05421687_10887 | SAMN05421687_10885 | Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | Small conductance mechanosensitive channel. | 0.497 |
ychF | SIS54847.1 | SAMN05421687_10887 | SAMN05421687_10886 | Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner. | Hypothetical protein. | 0.741 |