STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420625_01779Unannotated protein. (595 aa)    
Predicted Functional Partners:
GCA_000420625_03264
Unannotated protein.
  
 0.849
GCA_000420625_00932
Unannotated protein.
   
   0.759
GCA_000420625_03082
Unannotated protein.
    
 0.695
GCA_000420625_03066
Unannotated protein.
    
 0.688
GCA_000420625_02984
Unannotated protein.
    
  0.659
GCA_000420625_02356
Unannotated protein.
  
 0.635
GCA_000420625_02595
Unannotated protein.
  
 0.635
GCA_000420625_01549
Unannotated protein.
  
 0.555
GCA_000420625_03181
Unannotated protein.
  
 0.555
GCA_000420625_03271
Unannotated protein.
  
 0.555
Your Current Organism:
Fodinicurvata sediminis
NCBI taxonomy Id: 570952
Other names: F. sediminis DSM 21159, Fodinicurvata sediminis DSM 21159, Rhodospirillaceae bacterium YIM D82
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.