STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420625_02991Unannotated protein. (291 aa)    
Predicted Functional Partners:
GCA_000420625_02990
Unannotated protein.
     0.995
GCA_000420625_02989
Unannotated protein.
 
     0.962
GCA_000420625_02988
Unannotated protein.
 
  
 0.956
GCA_000420625_02992
Unannotated protein.
 
  
 0.941
GCA_000420625_02987
Unannotated protein.
 
  
 0.914
GCA_000420625_02996
Unannotated protein.
 
  
 0.821
GCA_000420625_02994
Unannotated protein.
 
     0.788
GCA_000420625_02993
Unannotated protein.
 
     0.782
GCA_000420625_00536
Unannotated protein.
  
 
 0.776
GCA_000420625_02019
Unannotated protein.
    
 0.637
Your Current Organism:
Fodinicurvata sediminis
NCBI taxonomy Id: 570952
Other names: F. sediminis DSM 21159, Fodinicurvata sediminis DSM 21159, Rhodospirillaceae bacterium YIM D82
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.