STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420625_03136Unannotated protein. (443 aa)    
Predicted Functional Partners:
GCA_000420625_03128
Unannotated protein.
 
 0.995
GCA_000420625_01177
Unannotated protein.
  
 0.989
GCA_000420625_01654
Unannotated protein.
  
 0.989
GCA_000420625_01656
Unannotated protein.
 
 
 0.981
GCA_000420625_03131
Unannotated protein.
 
  
 0.976
GCA_000420625_01658
Unannotated protein.
 
 
 0.968
GCA_000420625_01655
Unannotated protein.
 
 0.957
GCA_000420625_03134
Unannotated protein.
 
  
 0.957
GCA_000420625_03133
Unannotated protein.
 
  
 0.949
GCA_000420625_03129
Unannotated protein.
 
  
 0.929
Your Current Organism:
Fodinicurvata sediminis
NCBI taxonomy Id: 570952
Other names: F. sediminis DSM 21159, Fodinicurvata sediminis DSM 21159, Rhodospirillaceae bacterium YIM D82
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.