STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000686045_03323Unannotated protein. (463 aa)    
Predicted Functional Partners:
GCA_000686045_01299
Unannotated protein.
  
 
 0.859
GCA_000686045_03322
Unannotated protein.
     
 0.831
GCA_000686045_01296
Unannotated protein.
     
 0.788
GCA_000686045_03324
Unannotated protein.
       0.601
GCA_000686045_03321
Unannotated protein.
  
    0.593
GCA_000686045_01137
Unannotated protein.
    
 0.591
GCA_000686045_03325
Unannotated protein.
       0.535
GCA_000686045_00818
Unannotated protein.
   
 
 0.467
GCA_000686045_02301
Unannotated protein.
   
 
 0.467
GCA_000686045_00059
Unannotated protein.
     
 0.449
Your Current Organism:
Fodinicurvata fenggangensis
NCBI taxonomy Id: 570967
Other names: F. fenggangensis DSM 21160, Fodinicurvata fenggangensis DSM 21160, Rhodospirillaceae bacterium YIM D812
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.