Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKL33366.1 | dgkA | AB185_05300 | AB185_05310 | Damage-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | 0.435 |
| AKL33366.1 | lexA | AB185_05300 | AB185_05305 | Damage-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single- stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.735 |
| AKL35671.1 | dinI_3 | AB185_18005 | AB185_24935 | LexA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.423 |
| AKL35671.1 | lexA | AB185_18005 | AB185_05305 | LexA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single- stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.598 |
| AKL35671.1 | recA | AB185_18005 | AB185_13400 | LexA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.546 |
| AKL35671.1 | recN | AB185_18005 | AB185_14215 | LexA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | 0.587 |
| AKL35671.1 | sulA | AB185_18005 | AB185_25905 | LexA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | SOS cell division inhibitor; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | 0.679 |
| AKL36599.1 | lexA | AB185_23065 | AB185_05305 | DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single- stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.636 |
| AKL36599.1 | recA | AB185_23065 | AB185_13400 | DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.706 |
| AKL36599.1 | recN | AB185_23065 | AB185_14215 | DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | 0.510 |
| AKL36599.1 | sulA | AB185_23065 | AB185_25905 | DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | SOS cell division inhibitor; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. | 0.485 |
| dgkA | AKL33366.1 | AB185_05310 | AB185_05300 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | Damage-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.435 |
| dgkA | lexA | AB185_05310 | AB185_05305 | Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single- stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.549 |
| dinB | lexA | AB185_30680 | AB185_05305 | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single- stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.830 |
| dinB | recA | AB185_30680 | AB185_13400 | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.753 |
| dinB | recN | AB185_30680 | AB185_14215 | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | 0.506 |
| dinI_3 | AKL35671.1 | AB185_24935 | AB185_18005 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | LexA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.423 |
| dinI_3 | lexA | AB185_24935 | AB185_05305 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single- stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.639 |
| dinI_3 | recA | AB185_24935 | AB185_13400 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.740 |
| dinI_3 | recN | AB185_24935 | AB185_14215 | XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | 0.634 |
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