Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKL33404.1Post-segregation antitoxin CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)    
Predicted Functional Partners:
AKL33403.1
Taxon MazF; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.957
AKL33764.1
Cytotoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.818
AKL33838.1
Polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
AKL36554.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.536
AKL36240.1
4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.
  
     0.534
AKL37526.1
Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
AKL33837.1
Lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.480
pepE
(alpha)-aspartyl dipeptidase; Hydrolyzes dipeptides containing N-terminal aspartate residues. May play a role in allowing the cell to use peptide aspartate to spare carbon otherwise required for the synthesis of the aspartate family of amino acids.
       0.465
AKL36158.1
Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.439
AKL38416.1
Restriction methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.414
Your Current Organism:
Klebsiella oxytoca
NCBI taxonomy Id: 571
Other names: ATCC 13182, Bacillus oxytocus perniciosus, CCUG 15717, CIP 103434, DSM 5175, IAM 14201, K. oxytoca, Klebsiella sp. CECRI-24/07, Klebsiella sp. MN9SED2, LMG 3055, LMG:3055, NBRC 102593, NBRC 105695, NCTC 13727, strain 479-2
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