Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKL33617.1Branched-chain amino acid transport; Derived by automated computational analysis using gene prediction method: Protein Homology. (107 aa)    
Predicted Functional Partners:
AKL33616.1
Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.988
AKL33615.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.967
AKL33614.1
GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.710
AKL34968.1
Phage minor tail protein L; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.549
AKL36268.1
Phage minor tail protein L; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.539
AKL34967.1
Phage minor tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.520
AKL36269.1
Peptidase P60; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.517
AKL34969.1
Peptidase P60; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.506
AKL33594.1
Porin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
AKL34971.1
Phage tail assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.470
Your Current Organism:
Klebsiella oxytoca
NCBI taxonomy Id: 571
Other names: ATCC 13182, Bacillus oxytocus perniciosus, CCUG 15717, CIP 103434, DSM 5175, IAM 14201, K. oxytoca, Klebsiella sp. CECRI-24/07, Klebsiella sp. MN9SED2, LMG 3055, LMG:3055, NBRC 102593, NBRC 105695, NCTC 13727, strain 479-2
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