STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhmT_1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (426 aa)    
Predicted Functional Partners:
AKL33902.1
Xylose isomerase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.793
ghrB
Bifunctional glyoxylate/hydroxypyruvate reductase B; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GhrB subfamily.
 
    0.776
AKL38185.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.759
AKL33901.1
2-dehydro-3-deoxygluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.722
AKL34470.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.694
AKL34553.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
rbsR_1
LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    0.600
pcaK_4
4-hydroxybenzoate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.476
mhbT
4-hydroxybenzoate transporter; Uptake of 3-hydroxybenzoate (3HBA). Belongs to the major facilitator superfamily. Aromatic acid:H(+) symporter (AAHS) (TC 2.A.1.15) family.
  
    0.404
Your Current Organism:
Klebsiella oxytoca
NCBI taxonomy Id: 571
Other names: ATCC 13182, Bacillus oxytocus perniciosus, CCUG 15717, CIP 103434, DSM 5175, IAM 14201, K. oxytoca, Klebsiella sp. CECRI-24/07, Klebsiella sp. MN9SED2, LMG 3055, LMG:3055, NBRC 102593, NBRC 105695, NCTC 13727, strain 479-2
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.