STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL33936.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (683 aa)    
Predicted Functional Partners:
AKL35043.1
Stationary phase inducible protein CsiE; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.663
AKL37348.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.617
panM
Acetyltransferase; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion; Belongs to the PanZ/PanM family.
 
     0.594
ybaA
RNA signal recognition particle 4.5S RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.543
AKL36918.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.532
AKL33935.1
Ketodeoxygluconokinase; Catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.497
AKL38947.1
N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.495
AKL38338.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.466
AKL36876.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.463
AKL33697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.461
Your Current Organism:
Klebsiella oxytoca
NCBI taxonomy Id: 571
Other names: ATCC 13182, Bacillus oxytocus perniciosus, CCUG 15717, CIP 103434, DSM 5175, IAM 14201, K. oxytoca, Klebsiella sp. CECRI-24/07, Klebsiella sp. MN9SED2, LMG 3055, LMG:3055, NBRC 102593, NBRC 105695, NCTC 13727, strain 479-2
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