STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL33942.1Lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)    
Predicted Functional Partners:
AKL37176.1
Muraminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.771
AKL38887.1
Lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.745
AKL33943.1
GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.673
AKL36844.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.543
AKL36834.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.504
AKL36847.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.489
AKL36849.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.480
treF
Trehalase; Hydrolyzes trehalose to glucose. Could be involved, in cells returning to low osmolarity conditions, in the utilization of the accumulated cytoplasmic trehalose, which was synthesized in response to high osmolarity.
       0.464
AKL36836.1
Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.458
AKL36848.1
Phage capsid scaffolding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.455
Your Current Organism:
Klebsiella oxytoca
NCBI taxonomy Id: 571
Other names: ATCC 13182, Bacillus oxytocus perniciosus, CCUG 15717, CIP 103434, DSM 5175, IAM 14201, K. oxytoca, Klebsiella sp. CECRI-24/07, Klebsiella sp. MN9SED2, LMG 3055, LMG:3055, NBRC 102593, NBRC 105695, NCTC 13727, strain 479-2
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