STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKL34250.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)    
Predicted Functional Partners:
AKL33807.1
Citrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.654
AKL34249.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.626
yjjQ
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.574
ftsP
Cell division protein FtsI; Cell division protein that is required for growth during stress conditions. May be involved in protecting or stabilizing the divisomal assembly under conditions of stress; Belongs to the FtsP family.
  
  
 0.550
AKL38123.1
Multicopper oxidase; Laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.550
trmB
tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
   
    0.517
AKL37254.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.516
AKL34546.1
Arsenic resistance operon repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.480
malM
Maltose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.451
AKL37326.1
Mechanosensitive channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.438
Your Current Organism:
Klebsiella oxytoca
NCBI taxonomy Id: 571
Other names: ATCC 13182, Bacillus oxytocus perniciosus, CCUG 15717, CIP 103434, DSM 5175, IAM 14201, K. oxytoca, Klebsiella sp. CECRI-24/07, Klebsiella sp. MN9SED2, LMG 3055, LMG:3055, NBRC 102593, NBRC 105695, NCTC 13727, strain 479-2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.