Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKL34156.1 | AKL34598.1 | AB185_09695 | AB185_12115 | Regulatory protein CsrD; Regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; Derived by automated computational analysis using gene prediction method: Protein Homology. | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.783 |
| AKL34156.1 | AKL35104.1 | AB185_09695 | AB185_14895 | Regulatory protein CsrD; Regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; Derived by automated computational analysis using gene prediction method: Protein Homology. | c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.679 |
| AKL34156.1 | AKL35186.1 | AB185_09695 | AB185_15350 | Regulatory protein CsrD; Regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.675 |
| AKL34156.1 | AKL35710.1 | AB185_09695 | AB185_18205 | Regulatory protein CsrD; Regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; Derived by automated computational analysis using gene prediction method: Protein Homology. | c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.786 |
| AKL34156.1 | AKL36038.1 | AB185_09695 | AB185_19995 | Regulatory protein CsrD; Regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.680 |
| AKL34156.1 | AKL37019.1 | AB185_09695 | AB185_25275 | Regulatory protein CsrD; Regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.629 |
| AKL34156.1 | AKL38695.1 | AB185_09695 | AB185_34450 | Regulatory protein CsrD; Regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.765 |
| AKL34156.1 | AKL38743.1 | AB185_09695 | AB185_08500 | Regulatory protein CsrD; Regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biofilm formation regulator HmsP; HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.870 |
| AKL34156.1 | dosP | AB185_09695 | AB185_17130 | Regulatory protein CsrD; Regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-glycero-D-manno-heptose 1-phosphate guanosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.649 |
| AKL34598.1 | AKL34156.1 | AB185_12115 | AB185_09695 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Regulatory protein CsrD; Regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.783 |
| AKL34598.1 | AKL35104.1 | AB185_12115 | AB185_14895 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.785 |
| AKL34598.1 | AKL35186.1 | AB185_12115 | AB185_15350 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.788 |
| AKL34598.1 | AKL35710.1 | AB185_12115 | AB185_18205 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.757 |
| AKL34598.1 | AKL36038.1 | AB185_12115 | AB185_19995 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.801 |
| AKL34598.1 | AKL37019.1 | AB185_12115 | AB185_25275 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.748 |
| AKL34598.1 | AKL37764.1 | AB185_12115 | AB185_29380 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.765 |
| AKL34598.1 | AKL38695.1 | AB185_12115 | AB185_34450 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
| AKL34598.1 | AKL38743.1 | AB185_12115 | AB185_08500 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Biofilm formation regulator HmsP; HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.799 |
| AKL34598.1 | dosP | AB185_12115 | AB185_17130 | Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | D-glycero-D-manno-heptose 1-phosphate guanosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.797 |
| AKL35104.1 | AKL34156.1 | AB185_14895 | AB185_09695 | c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Regulatory protein CsrD; Regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.679 |
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