STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fucISugar isomerase; Converts the aldose L-fucose into the corresponding ketose L- fuculose. (591 aa)    
Predicted Functional Partners:
fucK
L-fuculose kinase; Catalyzes the phosphorylation of L-fuculose. Belongs to the FGGY kinase family.
 
 
 0.994
fucU
Hypothetical protein; Involved in the anomeric conversion of L-fucose.
 
  
 0.958
araB
Ribulokinase; Catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.921
araB_3
Ribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.908
rbtD
Glucose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
fucP-2
L-fucose transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.823
AKL33795.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.810
AKL34795.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.810
AKL37855.1
Fructokinase; Catalyzes phosphorylation of fructose; cytosolic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.810
AKL36208.1
Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.
    
  0.804
Your Current Organism:
Klebsiella oxytoca
NCBI taxonomy Id: 571
Other names: ATCC 13182, Bacillus oxytocus perniciosus, CCUG 15717, CIP 103434, DSM 5175, IAM 14201, K. oxytoca, Klebsiella sp. CECRI-24/07, Klebsiella sp. MN9SED2, LMG 3055, LMG:3055, NBRC 102593, NBRC 105695, NCTC 13727, strain 479-2
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