STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylEMFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (478 aa)    
Predicted Functional Partners:
AKL35041.1
Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.789
AKL35039.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.708
xylG_1
Xylose transporter; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
   
  
 0.607
xylF
D-xylose transporter subunit XylF; Periplasmic substrate-binding component of the ATP-dependent xylose transport system; high affinity; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.605
hcaT
3-phenylpropionic acid transporter; Transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.584
AKL36689.1
MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.511
gatC
PTS system galactitol-specific transporter subunit IIC; With GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.447
mlc_2
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.437
AKL38476.1
5-deoxyglucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.412
Your Current Organism:
Klebsiella oxytoca
NCBI taxonomy Id: 571
Other names: ATCC 13182, Bacillus oxytocus perniciosus, CCUG 15717, CIP 103434, DSM 5175, IAM 14201, K. oxytoca, Klebsiella sp. CECRI-24/07, Klebsiella sp. MN9SED2, LMG 3055, LMG:3055, NBRC 102593, NBRC 105695, NCTC 13727, strain 479-2
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