STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yehRLipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology. (155 aa)    
Predicted Functional Partners:
AKL38182.1
Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.655
yiaB
Inner membrane protein YiaB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.551
AKL36371.1
LpxA-like enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.518
AKL33697.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.495
AKL34963.1
Tail fiber protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.493
AKL34829.1
Regulator for glucitol utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.490
AKL35619.1
Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.478
AKL34524.1
Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.471
AKL34966.1
Tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.470
AKL38934.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.465
Your Current Organism:
Klebsiella oxytoca
NCBI taxonomy Id: 571
Other names: ATCC 13182, Bacillus oxytocus perniciosus, CCUG 15717, CIP 103434, DSM 5175, IAM 14201, K. oxytoca, Klebsiella sp. CECRI-24/07, Klebsiella sp. MN9SED2, LMG 3055, LMG:3055, NBRC 102593, NBRC 105695, NCTC 13727, strain 479-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.